omiRas: Web server for the annotation, comparison and visualization of non-coding RNAs.

Welcome to omiRas, a web server for the annotation, comparison and visualization of interaction networks of non-coding RNAs derived from small RNA-Sequencing experiments of two different conditions. For a short tour click on the images below.

Workflow

Get a schematic overview of an omiRas run.

HowTo submit a new project

Learn how easy it is to submit a new project.

Exemplary Analysis

Get a first impression how to interpret omiRas analysis results.

Currently supported organisms:
- Homo sapiens (hg19)
- Mus musculus (mm10)
- Sus scrofa (Sscrofa10.2)
- Arabidopsis thaliana (TAIR9)
- Medicago truncatula (Mt4.0)
- Solanum lycopersicum (SL2.40)

Test data is available for download here:
Download FASTQ data (Mus musculus)

Exemplary results are available here:

http://tools.genxpro.net:9000/omiras/7277231af3/results/ (Homo sapiens)	Link to GEO data · Link to publication
http://tools.genxpro.net:9000/omiras/d127912bb4a2/results/ (Mus musculus)	Link to GEO data · Link to publication
http://tools.genxpro.net:9000/omiras/575f8bad7e9f/results/ (Arabidopsis thaliana)	Link to GEO data · Link to publication

Due to important system updates, the omiRas submission system is currently unavailable.

Link to publication:
Müller S, Rycak L, Winter P, Kahl G, Koch I, Rotter B. omiRas: A Web server for differential expression analysis of miRNAs derived from small RNA-Seq data.
Bioinformatics. 23 Aug 2013. doi: 10.1093/bioinformatics/btt457 [abstract]

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