Results for Project: Zhang_et_al_Arabidopsis (575f8bad7e9f)
(note: pri_sequences can be expanded by clicking on the entry)
| id | chr | start | stop | strand | energy | pri_sequence | star_sequence | mature_sequence | Secondary Structure |
|---|---|---|---|---|---|---|---|---|---|
| chr3_2684 | chr3 | 16142773 | 16143022 | + | -64.2 |
GTTATCGACTATAACGTCATCGATACACGGAAGGGCTATGTTGTAGGAGATTTTTTAGATTGTGGTTTGACCTGTATTTATTTGACATGGAGGTTTATCTTGCAAAAAAAAATTATATTGAGGGTTTTTTTGCACAAAAATCTTTATGTTTTCAAACGGAGTTATCGAGTGCCACGTCATCGATACCCGGGAGGGTTGTATTGCGGGTGACTTCAGAGATTGTGGGATTGACTTGCATAATTCGGACTTG
|
GATTGTGGTTTGACCTGTAT
|
ACACGGAAGGGCTATGTTGTA
|
Show |
| chr3_2861 | chr3 | 16682775 | 16683024 | + | -48.2 |
AGAGGGAGAAAGAGAGAGGAGAGAGAGAACGGAAGAGAGAGGTACACAGAAAGAGAGATGAGAGAAATAGATAGAAAGGTGAATTTGGAATTAATATACAAAATATAGAGGATATCAGTTTTTTTTTTTTTTATGATAGTTTCTTAATTATAAACTTTTTGTTGGTTAGTTTTGCCAATTTCCCTTTTTAAAATTCCCTTTTTGGTTTTTGACTTCGTTGTTTTTTTAGACTTTTAAAATATGCCTAAGA
|
AAAATTCCCTTTTTGGTTTTTGA
|
GAGAACGGAAGAGAGAGGTACAC
|
Show |
| chr3_6959 | chr3 | 5881741 | 5881988 | - | -52.4 |
AAAATGTATATAGAGATATTCTTACCACGGTGATAATAGAGTTGGACTGTCCAGCCGCACTTAACGCCGTTTTGCAGCCGTCCAAATAGCCTTTCTATAGAAATTGGTTAACACAAATCCATGAGATTGTTAGTGCATTTGAATCTTGTACATTCCGTCATATTGCCACAAACGCAAATCTGATCGCGCGTTCCATTTCTTGGGAGTGTGATTCAAGACAGAAGGTTTCAGTCTAAGTTTTACTTAGCAC
|
TCCAGCCGCACTTAACGCCGTTTTG
|
CCACGGTGATAATAGAGTTGGACT
|
Show |
| chr4_3199 | chr4 | 16428256 | 16428503 | - | -68.6 |
AGAACTTGAGACTGTGTAAGGCTGTCATTATCGAGAAGTTGTCACTAAAACAACTAGGTTATGAATCTCCGCGGTATCGGGAAAGAACTCATTTTCAACAAATCGAGCCACAAGAGTTTCTAAAATAGTTTAATGTAACGAAACTCGGGAAGTTGTCAAGAGTTCTCCCGCGATATTTCGTTATGTTTGGAAAATTTTCAAAACAATGTAATGAAATATCGCGGAGAACTCATTTTCAACAGAATCACTC
|
CCCGCGATATTTCGTTATGTTT
|
ACAATGTAATGAAATATCGCGGAG
|
Show |
| chr4_48 | chr4 | 298516 | 298765 | + | -59.8 |
ATTATTCTCAAACGACGTTGTTTTGGATAGATTAGCAGTCATTAACGAGTTTCTAGGTTCTACTGATAAAGACATGTCTATTTTGGCCTGGTCAACGAATTTTTCATGTCTTAAATGGTAGTCAACGTTTACTTCATGTTTTAAATGGCCAAATAAGAAGTTGATGTTTAAAATGGCCACAATTTGAAACTTGACTAATAAAATTAACGGATGATAACGGACATTAGAAGTTCCGTTAATGACTGATAAC
|
GTCTTAAATGGTAGTCAACGTTTACTTCA
|
AAATTAACGGATGATAACGGACAT
|
Show |
| chr4_4837 | chr4 | 5943500 | 5943747 | - | -67.8 |
TCTCTTCGGGGAATCTCGGCGGCGGTCTCGTCGACTGATGGAGGAATTTCGCCGGTCGATTCAACCCTAGTTGATTCATATTCTCCAGATGAGTCTTTTACTCTAGCCATTGGAAAATAAATTTGCGGATATGAAAGAGACAAAGACGAACGAAAACGGAGAAGAAAGAAGAATAGAAGAGATTGATTTTTCCGGTGAAAGTGGTATCGTCGGAGACGAGAGAAGACGACGACGGAGAGAAGAGGAAGAA
|
GCGGTCTCGTCGACTGATGGAG
|
TCGTCGGAGACGAGAGAAGAC
|
Show |
| chr4_502 | chr4 | 2178953 | 2179202 | + | -78.4 |
CAAGATTTGACATTGCTTTAATTAGGAAGTGTTTGACGTGCTCGATCTGCTCTTCTATGTCTTCATCGTCATCACAAATTTCTTCAAACTTAAATATCTTAAGGACCTTCAACGGACTTGATAATAGAGATTAACGAACTTTGTGATGACAACGAAGATACAGAGGATCAAATCAAGTAGGTAAACCACTTTCTAAAGACAATGCCGAATCTTGAACAACTGATATTGTGGTACGATACACCAAATTATT
|
AGTAGGTAAACCACTTTCTAA
|
AGGAAGTGTTTGACGTGCTCG
|
Show |
| chr4_505 | chr4 | 2178942 | 2179191 | + | -82.2 |
CATCATTTGGTCAAGATTTGACATTGCTTTAATTAGGAAGTGTTTGACGTGCTCGATCTGCTCTTCTATGTCTTCATCGTCATCACAAATTTCTTCAAACTTAAATATCTTAAGGACCTTCAACGGACTTGATAATAGAGATTAACGAACTTTGTGATGACAACGAAGATACAGAGGATCAAATCAAGTAGGTAAACCACTTTCTAAAGACAATGCCGAATCTTGAACAACTGATATTGTGGTACGATAC
|
AGTAGGTAAACCACTTTCTAA
|
AGGAAGTGTTTGACGTGCTCG
|
Show |
| chr4_512 | chr4 | 2184046 | 2184295 | + | -63.5 |
TTACTCCTTGGTTGTTTTGTTGATGAGACTAGTGGATGTGAGGGATCACACCTCCTCCAACAATTGTTCCTTTGATGAGTGTGTCAAGCTCCTCATCTCCTCTAACCGCCAACTGCAAATGCCTTGGAGTTATCCTCTTCACTTTCAAATCCTTGTTAGTGTTTTCGGCCAACTGAAGAACCTCAGTAGTTAGGCATTCAAGGATTGAAGTCGTGTAGACAACATCAGTCGCACCAACAGTACCATGTGC
|
CTCCTCATCTCCTCTAACCGCCAACT
|
ATGAGACTAGTGGATGTGAGGGAT
|
Show |
| chr4_5149 | chr4 | 4677363 | 4677610 | - | -49.3 |
ATTGGGTTGTATGTTTTGTTTTGTGTGATGATATGTAGGTGTGGTAAATGTGTTTTGAGTGAATTGTTCGATGACTGGTTTGTTTGTGTTGTATTTGTGATTATACCCTTTTATTTGCTTGTGTGTATAGCTCGTAAATGGGAGGATCGCCTCACTAAGTATTTATGATAATACTTACGCATCTCATTGTATTGTTGATGCAGGTAAAGATAAAGTGTGATCGTGGAATCATGGGAAGGAAGAGAGGATG
|
GTTTGTGTTGTATTTGTGATTATAC
|
GTGATGATATGTAGGTGTGGTAA
|
Show |
| chr5_2676 | chr5 | 16716482 | 16716731 | + | -112.5 |
TGTAGCTATGCATTTGTAGAGAAGATGAAGAGTATGAAAAAGAAATTAATGGAGAAAATGAGGATTAACGCTAAAGATTTGTCTTCTTCGGTTCCGAGTTGTTGAAACTTATTTGGGGATGTGATGTGAAATTGGCTTGTTCTATCTTAAGTAAGTTATACTCAACAACAGATTTCACATCATATCTCCAAATCAGTTTTAACAACTCAGAACCGATCGAAGAAGACAGATCTTTAGCGTTAATCCCCAT
|
TCTTCGGTTCCGAGTTGTTG
|
ACAACTCAGAACCGATCGAAGAAG
|
Show |
| chr5_3017 | chr5 | 18193429 | 18193524 | + | -29.5 |
CAGGTGATAAACGACTTACACGACAGTCGCATAGTAGTCGTAAAAAATGATAATACGACTAATCAGCGACTAACGACGTTAGTCATTATTACATTG
|
CAGTCGCATAGTAGTCGTAAAAAA
|
TAATACGACTAATCAGCGACTAAC
|
Show |
| chr5_4431 | chr5 | 21969681 | 21969928 | - | -61.6 |
AGAATGTGTGGACTTTCTTGTTTGGCCATTTAAAAGTTTTAGTTTCGAGAAATTCTTAGTGTTAATAAATTGACATATCCAACGAGAGTCACGTGATCCAAGAGTTTATCGAACGACGTGATTGATTAACTTGTTTCAGAAGTAATTGAAGGTCTTCTTCAATGTTTTGAAACCCGACCCGTACGATGAACTGGACTACATTTTAGGTTACTGGGTCATCGGGTCAACCGGGTTGGACAACGGGTTAATT
|
CCCGTACGATGAACTGGACTAC
|
GGTTACTGGGTCATCGGGTCAACC
|
Show |
| chr5_5299 | chr5 | 16826291 | 16826538 | - | -46.2 |
TGGCCGGCGTTTCCAGTGTATTTGAAGGAGTTGTAGAGTGATAGGGAAGAATTCATAAATTTCTCTTTATCTTTAATTTCTCGTAGTGCAAATGTAAAAGCGGATAAGTTGGCACGAAAGATTCGTACCGTACCGCATCATGTCACGTATGTAAACAATATCTCTCGGGATTGGATCTTTTGAGTTCAAATTTATATCGGTTGACAAAAAAAAAAAAAAAAAAAAAAGGAAGAAATTAAAGTATTGATGA
|
CTTTATCTTTAATTTCTCG
|
AAGGAGTTGTAGAGTGATAGGGAA
|
Show |
| chr5_6277 | chr5 | 12824207 | 12824454 | - | -59.9 |
AGCTCGTTAAGACTAGATGGGGTATCCCTACATAGCGGGTGCGACCCACGGCGAATGGTTTATCAGGTCTTCAAAAAAGAATATATACGATTGCATTCCATATACTAACGGATGCGATCATACTAACACTAATACACTGGATCCCATCAGAACTCCGCAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCCGGGAAGTCCTCGTGTTGCATCTCTCTGTTTTTTTTAATTTGTTTC
|
GAGAGTAGTACTAGGATGGG
|
AGTCCTCGTGTTGCATCTCTC
|
Show |
| chr5_6309 | chr5 | 12824207 | 12824454 | - | -59.9 |
AGCTCGTTAAGACTAGATGGGGTATCCCTACATAGCGGGTGCGACCCACGGCGAATGGTTTATCAGGTCTTCAAAAAAGAATATATACGATTGCATTCCATATACTAACGGATGCGATCATACTAACACTAATACACTGGATCCCATCAGAACTCCGCAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCCGGGAAGTCCTCGTGTTGCATCTCTCTGTTTTTTTTAATTTGTTTC
|
GAGAGTAGTACTAGGATGGG
|
AGTCCTCGTGTTGCATCTCTC
|
Show |
| chr5_6992 | chr5 | 9095896 | 9096143 | - | -47.2 |
GTAACATAAAACTGTATAAAAATTTTATCTGTTAGCTGGAGCGGTAAGCTTTTCAGAATAGTGCAAAACTGTAAAAAAAAGTTGTACGAGAAAGTTATACAATAAAGCTGAGAGTAAATTTTTGTGCAACGTTTTTGATAAAAAATTTGTGATTGGTAGAAATGAAAGCTGTACAAATTATAATACTTTGTTTTCGTTCACTAATTAAAGTCAATATTTCCGAAAAATGTAAATTATTACAAATCTGTGT
|
TACAATAAAGCTGAGAGTAAA
|
TTATCTGTTAGCTGGAGCGGTAAG
|
Show |
| chr5_7867 | chr5 | 1754919 | 1755166 | - | -47.1 |
AGTTCATTGTAAATCAAGAGATGATGATCATGGCTTCCATATTCTACAAAAAGGTGGATTATATGGTTGGATGTTTTACGTGAATTTTATGAATTCGACACTCTACTTCTGTGGATTTAGCCAAGAACAAGTAAAAAAAGGTGTGTTCGATATTTATAAAGCGGTTAGAGATTCTTCTAGATGTAGAAATTGTACTTGGGAAGCAAAGGAAGATGGTATTTATGGATATGGCGAGATTCCTAAGAAAAAT
|
ATTTATAAAGCGGTTAGAGATT
|
AGGAAGATGGTATTTATGGATAT
|
Show |
| chrC_147 | chrC | 35026 | 35273 | - | -61.0 |
TTTTTACTTCTTAGCATGATAAATAAATTTTTCTGGCTCGGCTGGATAGTATAGCCGAGCCAGAAAAATTTAGATTGAATTGAAAGAAACAAAGAAGACTTTTTAATATGAACCTATTTGTTTTACCTACTACTTTAGTTAAGAGGAGTCATGGAAAGAACAGGTTCAAAATCACGATCAATTCCTTTTTCAAATCCCGCTGCCGCTGCCCGAGCCCTTCCCGCGTGCCATAAATGACCCACGAATAGGA
|
GCCGAGCCAGAAAAATTT
|
ATTTTTCTGGCTCGGCTG
|
Show |
| chrC_196 | chrC | 271 | 401 | - | -41.2 |
GCTCCATCTACAAATGGATAATTCGTTAGTGTTAGTCTAGATCTAGTTTAGTAAAAAACGAGCAATATAAGCCTTCTTTAAATAAGAAAGAGGGCTTATATTACTCGTTTTTTTCTATAAAAATGAGCAAATT
|
CGAGCAATATAAGCCTTCTTTA
|
AAGAGGGCTTATATTACTCGTT
|
Show |
previous 2 of 3 next