Results for Project: Osanto_et_al_Reneal_Cancer (7277231af3)
(note: pri_sequences can be expanded by clicking on the entry)
| id | chr | start | stop | strand | energy | pri_sequence | star_sequence | mature_sequence | Secondary Structure |
|---|---|---|---|---|---|---|---|---|---|
| chr10_1248 | chr10 | 53442934 | 53443043 | + | -35.8 |
tcaagaaaatgcacatcaaaaccacaatgaggccaggcacggtggctcgtgctaatcccagcactttgggaggccaaggcggaggttgcagtgagccaagattgtgccac
|
atcccagcactttggga
|
ccaaggcggaggttg
|
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| chr11_1340 | chr11 | 61197488 | 61197597 | + | -63.3 |
CCGCCACTTCCGGCATGCGCAGGGACGCACCTTCCGGCTCAGCTCCTCCGTGGCTGCCGTGGTCGGCTGGCCGGGCGGCTAGGAGTTCCCGGAAGTGCCCGCGCAGCCGG
|
GCTCCTCCGTGGCTGCCGTGGTC
|
CCGGGCGGCTAGGAGTTC
|
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| chr11_4972 | chr11 | 66725508 | 66725615 | - | -62.5 |
CGACGCAGCGGACGGCGCCCCTCCCCCTCGCGCGGGGGCTCGGCCGGCTGGACCCGCCCCCGGACCCGCCCCCGGCTGCAGCCCCCGAGCGCCCCTCCGCAGCGTCCGCC
|
GCGGGGGCTCGGCCGG
|
GGCTGCAGCCCCCGAGC
|
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| chr11_5167 | chr11 | 63900531 | 63900638 | - | -50.3 |
GCTCCGTGCATCTGTGCAGGAATCCAAGGCGCTGGGGGCTGCTCAGGGACGGCTTCCTGTGGGAGGTCTTCCTGGGGAGGTCTAGTTCCCCACAGGGCGCTCTGGCTGGG
|
CCCCACAGGGCGCTCTGGC
|
CAAGGCGCTGGGGGC
|
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| chr11_5869 | chr11 | 28420903 | 28421010 | - | -30.3 |
TGTGTCTTATATAGAAGTTTTCTGCAAAGGATGAAAGGAGAGTTTCATTTTCCCTAATAGTAGCCGCAGGTAAAAGAGAATGAAATTCCCTTAGTCTTGATGCATGAAAA
|
TCCCTTAGTCTTGATGCA
|
CAAAGGATGAAAGGAGAGT
|
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| chr12_1203 | chr12 | 56122921 | 56123030 | + | -55.5 |
CACTgggcccggcgcggggtgggccgagccccccgcccggccAGGGCCACGTGGCCCCTACCCGGAAGAAGGCGCCCACCCCCGCAAAGGGAAAGCCGCAAGGGCAAGAC
|
gcgcggggtgggccgagccc
|
GCGCCCACCCCCGCAA
|
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| chr12_4123 | chr12 | 103386105 | 103386212 | - | -40.6 |
TCCTGACAGACCTCCCTCCACCGTAAGAGGGAAGCACTGGGGAGCTCTGTGGTGGGAGCTTTGTCCTTCTACCTGGAAAATCTCTAGCCACAGGACTAGGTCTGCTTTTC
|
GTGGGAGCTTTGTCCTT
|
GGAAAATCTCTAGCCA
|
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| chr12_4425 | chr12 | 84094794 | 84094901 | - | -31.0 |
AGGAAAGGCTTTCAGTTATTCCATATTCACTATGATTCTAGCTGTGGGTCAGTGTGAGTCAGCGAGTGAGTGTGTGTGTGTGAGTGAGTCAGTGTGTGTGTGTGTGTGTG
|
TTCAGTTATTCCATATTCAC
|
GAGTGTGTGTGTGTGAGTGAGTC
|
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| chr12_4599 | chr12 | 69201909 | 69202016 | - | -57.3 |
CACACAGGGCCACACAGGCCCCAGAAGCAGCCAAGCTCGCCGCGGTGCCTCGGTGCGCGCCCCCTACCGCCCGAGGGGAGCGCGCGGGTCGTCGCGGCGCATCCGGGCAT
|
CCTCGGTGCGCGCCCCCTA
|
GGGGAGCGCGCGGGTC
|
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| chr13_2642 | chr13 | 84187798 | 84187905 | - | -54.9 |
GCGGGGGTGGGAGCCGGGGCTGCCCAAGGCGCTCGTGGGCCGGCATGGGTTCCAGGTGGGCGTGGGCTTGGCGGGCCCTGCACTAGGCACGGCTGGCCGGCACCTGCTGG
|
AGGTGGGCGTGGGCTTGGC
|
CAAGGCGCTCGTGG
|
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| chr13_519 | chr13 | 42622143 | 42622252 | + | -45.8 |
CGTGTGCGCCGGATGGGGGTGGGGGTGGGCCAGAAACTGAACGCCGCCGTCAGGAGAGCTGAGGGGACCCGACGGCCCTGGCGGAGGCGGGAGAGGTACGGTCCTCGGAG
|
GCCGTCAGGAGAGCTGAG
|
CGGCCCTGGCGGAGG
|
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| chr14_3451 | chr14 | 65937810 | 65937911 | - | -76.9 |
AGTTGGTAGAGGGCAGAGGGATGAGGGGGAAAGTTCTATAGTCCTGAGATCTAATTACAGGACTATAGAACTTTCCCCCTCATCCCTCTACCCTTACCACCACA
|
GAGGGGGAAAGTTCTATAGTCC
|
ACTATAGAACTTTCCCCCTCAT
|
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| chr16_3471 | chr16 | 76682972 | 76683079 | - | -41.7 |
AAGAAGACACAACTGGCTGGCTGGGGCAGTCGGAGATGCTCAGCAGCCCGACTCCAGGGGAAAACCATCTCCTTTCTGGCTGCCCCATCTGCTCAAAGCTACTTCTACTC
|
TCTCCTTTCTGGCTGCCCC
|
GGCAGTCGGAGATG
|
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| chr16_5524 | chr16 | 419310 | 419417 | - | -58.0 |
TCTGGGTACACAGTCAGGACCCGGGTCGGGCTGGGGCGGCACTGGGCTGGGGGCCGGCCCAGTTAGCTCTAGGTCCCCAGTCTGACAGCAGTGGTTCTGTGATGGAGCCT
|
GTCCCCAGTCTGACAG
|
GTCGGGCTGGGGCGG
|
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| chr17_3259 | chr17 | 72932132 | 72932239 | - | -59.0 |
GAGTAGGGGCGCGGAGCGCGGGTTGCGGGGCGGGTGGAGGGGCCGGCCTCAGATTAAAGGGAGTTCACCTCTCCACAGTCACCCCGCTTTCCCGTTCCAATCCCTGCAGC
|
CCACAGTCACCCCGCTT
|
GCGGGGCGGGTGGAG
|
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| chr17_3470 | chr17 | 65822054 | 65822161 | - | -73.3 |
CCGCCGCCCCCGCCCCCCGTCCTGCCGCCCCCGCCTCCTCGCCCCCCCCGGCCCGGGGCGCTGGTGCTGGGGGGGGCCGGCGGCGGCGGCGGCGGCTTCCTCCGGCTACT
|
CCCCGCCTCCTCGCCCCCCC
|
GGGGGCCGGCGGCGGCGGC
|
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| chr17_4075 | chr17 | 45855685 | 45855792 | - | -56.3 |
CGCTCAGGGCGCAGGCCATCGAGGCCAAGGCGCGCCGGGTCCCTCCCGCTCGGGCGTCTCTGGTCCTCCGGCTCTGCCCCGTGGCCACCCGGCCTGCTGCACCGAGAGCC
|
CGGGCGTCTCTGGTC
|
CCAAGGCGCGCCGGG
|
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| chr17_5150 | chr17 | 6323191 | 6323298 | - | -44.9 |
GGCCTGGCCTGCATCTGGAGTTGCAAACGTGGCAAAGGAATACAGCACAGGTGCAGGTGTTGCTTGTCCTGGGGCCAAGGCGCCTCCCTGTCTGTGAGAAATGGCCAGGC
|
GGTGCAGGTGTTGCTTGTCC
|
CCAAGGCGCCTCCCTG
|
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| chr17_85 | chr17 | 1633582 | 1633691 | + | -56.8 |
GCAGGTggttgagtggggtgccgtggggtggggtgggaggggtgATGAGCCCCTGTTATCTGAGGAGCTCAGGGCCTGCTCCCACCCCGCAGATACAGCCTGCAAGATGG
|
ggtgggaggggtgATGAG
|
CAGGGCCTGCTCCCACCCC
|
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| chr18_289 | chr18 | 13913160 | 13913269 | + | -39.8 |
TAGGGAGGCATGAAGCCCAGGCTGGAGTGTTCTGGTTGGAAATCAGTGTGATGCTCAGCTCCCTGCACAGCCTCACCTGGACCACCACCTTCCACCCGCTCACATCTCCC
|
GGTTGGAAATCAGTGTGATGC
|
CTCACCTGGACCACCAC
|
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