Results for Project: Osanto_et_al_Reneal_Cancer (7277231af3)
(note: pri_sequences can be expanded by clicking on the entry)
| id | chr | start | stop | strand | energy | pri_sequence | star_sequence | mature_sequence | Secondary Structure |
|---|---|---|---|---|---|---|---|---|---|
| chr5_3163 | chr5 | 167592839 | 167592948 | + | -56.9 |
AAAGAAACTCCCAGTTAATTCAGAGTTGCTTATGTCAGGTGAGAGGGGTAGACACCAATTCTCTCTCACCTGGCATAAGCAATTCACAATTAACTGAGTTCTTTTTTTGG
|
GAGTTGCTTATGTCAGGTGAG
|
CACCTGGCATAAGCAATTCAC
|
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| chr5_3455 | chr5 | 176812408 | 176812517 | + | -69.3 |
CACCTCACCACCACCACACACACCCCTCCGAGACTCACATGCAGGTGCCCAGCACAGATGTGCACATGTGAGTCTGCATGTGAGTCTCGGAGGGCTGTGGTGGTGATGAT
|
GCATGTGAGTCTCGGAGGGCTG
|
CCCCTCCGAGACTCACATGCAG
|
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| chr5_4793 | chr5 | 139553909 | 139554016 | - | -49.8 |
CTTGCTTGCTATTAGGTTGGTGCAAAAGTAATTGTGGTTTTTGCATTTTTTTTTTAAATGGCAAAAACAGCAATTACTTTTGCACCACTCTAATATAAGTATATGCCTAC
|
TTGGTGCAAAAGTAATTGTGGTT
|
CAGCAATTACTTTTGCACCACTC
|
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| chr7_2319 | chr7 | 102251622 | 102251731 | + | -57.1 |
GGGCGGGATCGGGGCGGGGACTCGCGGCAGGCTCCTCTCTCTTTTGGCCCCTCGGGAGGAGTGCGGGGGAAGAGAGCGGAGGCTGAGTCTCCGCGTCCTGGTTTGGAGAC
|
TCGCGGCAGGCTCCTCTCTCTTT
|
AGAGAGCGGAGGCTGAGT
|
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| chr7_2325 | chr7 | 102251622 | 102251731 | + | -57.1 |
GGGCGGGATCGGGGCGGGGACTCGCGGCAGGCTCCTCTCTCTTTTGGCCCCTCGGGAGGAGTGCGGGGGAAGAGAGCGGAGGCTGAGTCTCCGCGTCCTGGTTTGGAGAC
|
TCGCGGCAGGCTCCTCTCTCTTT
|
AGAGAGCGGAGGCTGAGT
|
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| chr7_6924 | chr7 | 6845054 | 6845161 | - | -35.8 |
TAACTAGCCAGTGCTCATATTTTTTAAGTCCTAGTTTTCCCGCTAGTCAGCAGTAGAGTGTGGGCATCTTTCTGTGTCCCACCGACTGCGAGCTGGAGACAGCAGTGGTA
|
CAGTAGAGTGTGGGCAT
|
GTCCCACCGACTGCG
|
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| chr8_1226 | chr8 | 48802603 | 48802712 | + | -28.0 |
CAATGCAAAGTTTTAGAAAAGCCAAAACCTAGCCTTCTCTTCCTGGTTCTTCCTGAAGTCAGGAAAAGCTGGGTTGAGAGGATGAAATataataataataataataataa
|
CTTCTCTTCCTGGTTCTTC
|
AAAGCTGGGTTGAGAGGAT
|
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| chr8_2666 | chr8 | 131489305 | 131489414 | + | -33.7 |
ttggcatctcctcaatgtactaagcgttgggaatgtagagactgaccaaagtatggtctctaccttcaaggagctcacagtctattggggaaaaagatatagacagaGCT
|
aatgtactaagcgttggg
|
aggagctcacagtctattgg
|
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| chr9_1824 | chr9 | 116896796 | 116896905 | + | -34.6 |
TGAGGGCAGCAAAGGGGAGCAGGAGAGGGAAGGGGACAGGCGAGAGGTGAGTCTGTGGCATGAGCTGCACAGCAGGCACAGCCAGGCCTCTGATCCCCACCCCAGGCACT
|
CGAGAGGTGAGTCTGTGGC
|
CAGCAGGCACAGCCAGGCC
|
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| chr9_2349 | chr9 | 133282088 | 133282197 | + | -43.2 |
CCTGTGGTGAAGGCTTTGctcggctccaccacttcctggggagggaccttgggcaggtataatagttcagcctgtctgagcgccgctctccatctgtcaaatggacataa
|
gggaccttgggcaggt
|
ctgtctgagcgccgctc
|
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| chrX_3575 | chrX | 115861086 | 115861193 | - | -44.0 |
GCAGGCTCAACGCCACGTGGAAGCGGCCAAGGCGTGGGGCCTGCACCCTCTGAAGCAATGCCTCAAGCTGTACCTTGGCCCATTTTCACCATGGCTGGAGCTGGAGCAGC
|
CCTCAAGCTGTACCTTGGCCC
|
GCCAAGGCGTGGGGCC
|
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| chrX_4167 | chrX | 70401381 | 70401488 | - | -60.9 |
CTGTGAAACTCACTAGATCTGTTAGGCTGGTGCAAAAGTAATGGCGGTTTTTGCCGTTAAAGGTAATTGCAAAAACCGCCATTACTTTTGCACCAACCTTCAGGTTCGGG
|
CATTACTTTTGCACCAACCTT
|
GGCTGGTGCAAAAGTAATGGC
|
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