Results for Project: Pandis_et_al_rheumatoid_arthritis (d127912bb4a2)
(note: pri_sequences can be expanded by clicking on the entry)
| id | chr | start | stop | strand | energy | pri_sequence | star_sequence | mature_sequence | Secondary Structure |
|---|---|---|---|---|---|---|---|---|---|
| chr10_1593 | chr10 | 127542235 | 127542372 | - | -52.3 |
TCAGCTCTGTTCTCTGCGCCCAGCCTGGCGTGACAGAAGCTGATCTCTGACAGACAGCATTCTCTCACCCCAGGGCTGGCTGTGGACTATCACAATGAACGGCTCTACTGGGCAGATGCCAAGCTTTCGGTCATCGGCAG
|
ACAGCATTCTCTCACCCCAGGGC
|
CTGGCGTGACAGAAGCTGATCT
|
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| chr10_1797 | chr10 | 111506740 | 111506877 | - | -58.4 |
GCACTCCTTCCTTCAGCGCCTTGCAGCCGCTGTTCTCCAGCATCCTTCCGGCATAAGGGGTGCTGCTGCTCCGCTCGGCCTTCAGGCTTCCAGACGCTCCGGCTGGGGGTAGCAGTAGCAGCCCTGCGCCGTCCTCGCCC
|
CTGCTGCTCCGCTCGGCCTTCA
|
CCGGCTGGGGGTAGCAGTAGCA
|
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| chr10_2145 | chr10 | 81416181 | 81416318 | - | -48.3 |
CAATCTGTGATGTTAGGACTAGCTCAGGCTACAGAGCGAGAACCTGCTTCAAAAACACCAGACTCACTATGTAGCCCAAGCTGGCCCACTTCCTTCTAGATTCTCAGACCCCGCAGTCCCCAGAAGGGAGCGAGGGCCCA
|
AGACTCACTATGTAGCCCAAG
|
CAGGCTACAGAGCGAGAACCTGC
|
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| chr10_2278 | chr10 | 77977548 | 77977685 | - | -49.4 |
TTTTAAGTAATCACAAATGAATTTTTGTTTTGTTTTCTTCTGGAGAAAACAGATCTCCAGAAGAAAACAAAACGAAAGATTGTAGGTTGAAATCTTCATATCTTTTTCTATCCTACAGATTACACCGGGACAGGCACTGG
|
CTCCAGAAGAAAACAAAACGAA
|
TGTTTTGTTTTCTTCTGGAGAA
|
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| chr11_1412 | chr11 | 95176862 | 95177001 | + | -45.4 |
TGATCAAGAGAAATAAGTAGATGCCCAGCACCGAGCCCCAGTAATCTGAAGGCCTGCAGCTCCTTCCGATACAACGGGCTAATTCACCTAAAGACTGTGGGAGTGGAGCCTGCGGCTGATGACAAAGGGGTCGTGGTGGT
|
GCCTGCAGCTCCTTCCG
|
GAGTGGAGCCTGCGGCTG
|
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| chr11_2068 | chr11 | 120676203 | 120676342 | + | -45.2 |
CTGGGTGATTTCCCCCCCCCCTCCTCGATGATGATGGCACTGAGGGAGCCTCTTTCCCTTCTCTTCCAAGGGGCAGGTATTGGTTTCCTGTTGGCCCATCAGGGGATGCCAGGAGCCACGCATCAAGGTCCAAGGCTGCC
|
TCCTGTTGGCCCATCAGGGGA
|
CTCGATGATGATGGCACTGAGGGAG
|
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| chr11_2111 | chr11 | 121387124 | 121387261 | - | -56.6 |
TTGGGCTTGCAGACTGCTTCCTGCATCTCCAGCCCCCTGGCAATGCCACAAGGCAAGGCCCTAAAACTGTGTGGTCCAATGCCATTTAACTACCAGGTTGGACCGCACAGATTTAGACCTTTCCTTTAGGACAAAGCTCT
|
GCCCTAAAACTGTGTGGTCCAAT
|
TGGACCGCACAGATTTAGACCT
|
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| chr11_2549 | chr11 | 102309601 | 102309738 | - | -49.4 |
GTTCTGGGGGAGGAGAAGATGCTGAACATCAATAAGAAGCAAACCACCAGTCCGGCCTCCAAGAAGCCTTCACAGGAAGGTGGCAAGGTGAGTGTCCCATGCCCGTGGGGGTGGGGGCCAGGATGGAGCCGCTCACAGGA
|
GCCTCCAAGAAGCCTTCACAG
|
GTGGGGGTGGGGGCCA
|
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| chr11_2586 | chr11 | 101419166 | 101419273 | - | -44.3 |
GATTCCAGGAGAGCAGCTGGGGGAGGGAGGGAGGAGCAGCATCTGTGAAGGCTGCCATAGAAACCACAGGTGCTGTCTTCTTCTTCCAGGATGATTCTGACAGCTAACTA
|
GGGAGGGAGGAGCAGCATCTGT
|
AGGTGCTGTCTTCTTCTTCCAGG
|
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| chr11_2588 | chr11 | 101316329 | 101316466 | - | -77.4 |
CCACCTTCAGCAACGAGGCCATGGCCAGGCCGGGCCGTGTCCGCTCCGCTGGGTGCCGGAGGTGCTCTGGGCTCCGGGGAGGGCACCGGAGGGGCCTGAGGAATCTCCGTTGCCCTCGGGACCCGGGCACCCTCGCTGGC
|
GGAGGGCACCGGAGGG
|
CTCCGTTGCCCTCGGG
|
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| chr11_2905 | chr11 | 86852579 | 86852716 | - | -46.0 |
AACTTTGAAAGCTTAGCTGGTTATATCGAACTCGTCCACAGAAGCAGAGGGGGCTATGTCTACAGCGCCAGCTGCCTAATTGATTGTCTCTGTTAATTAGGCTCTGGATCTGTGAATGGAGCCCCTCAGCCGCAACAGCA
|
CTACAGCGCCAGCTGCCTAATTG
|
ATTAGGCTCTGGATCTGTGAA
|
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| chr11_3276 | chr11 | 69837613 | 69837750 | - | -62.6 |
CGGATCATCACTCTCGAGCTGGGATGGACGCGGGGCGGGCGGGCCCTGGCGCGCAGAGCCAGGAGTCCGGGCCTCCTGGCTACTGAGCATTTCCCAAAGCCTCCCCTAGCCCTTGCCTTCCTTCCTAGGAGCCGCACCGA
|
CTCCCCTAGCCCTTGCCTTCCTT
|
GGACGCGGGGCGGGCGGGC
|
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| chr11_3277 | chr11 | 69837689 | 69837826 | - | -79.3 |
TGCGCCGCTCTCTCGGCAGGGGGCGGGGGAGGCGGCCGCGCGGTGACGCGCGGGGCTGCTGCGGCTGCTCCGCCGGCGGATCATCACTCTCGAGCTGGGATGGACGCGGGGCGGGCGGGCCCTGGCGCGCAGAGCCAGGA
|
CTGCTCCGCCGGCGGATCAT
|
GGACGCGGGGCGGGCGGGC
|
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| chr11_3309 | chr11 | 69407308 | 69407445 | - | -45.6 |
CCCGGATTGGCCGCTTGCAGCAGGTGGGACGAGGCAGGACATTAGGTGGCTAAGTTGTGCCTTCTAGCACAATGTCCCCAATTAATCTTCCTCTGCCCTTTGCCCTTTGCCCCTCCCAGGCCCAGCTCTGGAACTTTCAT
|
TTAATCTTCCTCTGCCCTTTGCCCTTT
|
TGGGACGAGGCAGGACATTAGGT
|
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| chr11_3502 | chr11 | 60202206 | 60202343 | - | -53.5 |
GCCCCAGCTTATTAAGGCATTGGTGTGGGAGGGGACTGTAGAGAGGAGGGTGCCTAACCTCTGTTCTGCTCACCCTTCTCACAGTGGATCCGCTGGCCCAGGTGACCCGGCTATTCCGTGAACATCTCCTAGAGCGAGCG
|
TTCTGCTCACCCTTCTCACAG
|
GTGGGAGGGGACTGTAGAGAG
|
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| chr12_1753 | chr12 | 84829396 | 84829499 | - | -44.9 |
CCTGACGGTGGTGGGCACTCTTCACAGGGCAGAAGTGAGGTTAGGAGCCTGTTTCTCGGCTCTGATCCCAACCCTTCTGCCCAGCCTCTGTGAACCCCTCGCTGGT
|
AGGGCAGAAGTGAGGTTAGGAG
|
CTGATCCCAACCCTTCTGCCCAGC
|
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| chr12_2459 | chr12 | 13245047 | 13245147 | - | -41.3 |
AATCAAAGTTGCCTGGGGCAGTGTGAGTTATCTTGAGGCACTTGACGTAAAGTTAGCTAGTCAAGTGTGACAAGATCTCTACATGGCACTATGCTGACTTTGA
|
CAAGTGTGACAAGATCTCTA
|
GAGTTATCTTGAGGCACTTGAC
|
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| chr12_431 | chr12 | 54135113 | 54135252 | + | -45.3 |
gcattatcctgttcaggtatttaatatggggaggtggaacacgagcgtacgcgttaggacctgaaagatggtgaactatgactgggcagggcaaagccagaggaaactctggtggaagtctgtagcagtcctgacctgca
|
caggtatttaatatggggaggtgg
|
acgagcgtacgcgttaggacctgaa
|
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| chr12_9 | chr12 | 3555520 | 3555659 | + | -46.8 |
gatggctacacagaactgaactcaggtcttctgcaagaatagtaagttctcttaacgcttgagccgctggttgcagtggtgcacactggtaggatttgctgaaggaggcagaggcaagaggatcacgagttcaaggccat
|
ggtcttctgcaagaatagtaagttctc
|
ggatttgctgaaggaggcagaggcaag
|
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| chr13_1877 | chr13 | 76018460 | 76018597 | - | -56.8 |
GCACGCTGCTGCTTCCGGTCGGACACCGCCCGGGCCTGCACTTCCTGCGTCCGCTGGCAGCGGTTCCGAGTCCTCGGGTGTCTGAGCAGGGAGCGTTTGGACCCTCGTGGACTGGCATTGGCAAGAGCCTCAGTGAACTG
|
TTCCGAGTCCTCGGGTGTCTGAG
|
TGGACCCTCGTGGACTGGCATT
|
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