Results for Project: Pandis_et_al_rheumatoid_arthritis (d127912bb4a2)
(note: pri_sequences can be expanded by clicking on the entry)
| id | chr | start | stop | strand | energy | pri_sequence | star_sequence | mature_sequence | Secondary Structure |
|---|---|---|---|---|---|---|---|---|---|
| chr14_499 | chr14 | 54603294 | 54603433 | + | -73.3 |
TCAAGGGCAGCCTCTAGAGCCCACTCCCCGGGGCCCCAACTCCTCGTTTCCGAGACTGCCGCACCCGTGTGCCGCAGCCGCGCGAGAACGCGGAGCCCGTGTACCCGGCGGCGCGCGCAAGGGGTGCGGCACCGCCCCGC
|
GCCGCAGCCGCGCGAGAAC
|
ACCCGGCGGCGCGCGC
|
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| chr14_724 | chr14 | 69692232 | 69692336 | + | -32.5 |
TTAGGGAAGACCCAGGCTCTGTCCTGGAGTGGAGGACAGTCAGAAAGGCAGTTGTAGCATTCTCTGTCTTGATCCTCTCCAGGTTGTCATTAACCCCAACTATGA
|
CTCTGTCTTGATCCTCTCCAGGTT
|
CCTGGAGTGGAGGACAGTCAGAA
|
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| chr14_769 | chr14 | 72980241 | 72980380 | + | -81.4 |
GACGGAGTCGGAAAGGGCCGGGTCGGGGTCGGGGCCGGGTGGGGGCGGCGCAGGCTGGGCACGGGCTCGCGGTCCAACCACGCAAGTGCCCCTGTCCCTGCCCGGCCCCTGTCCTCCCGCTCGCCCCGAGTGGCACCCAA
|
CCCCTGTCCTCCCGCTCGC
|
GGGTCGGGGTCGGGGCC
|
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| chr15_1319 | chr15 | 102328626 | 102328732 | + | -39.9 |
GAGGAGGTGAGCGACGGGAGCTTAAGGGGAGAGGTGTGGTGTAGGACAGGGTCTCTCTAGTCTTTCATTCACCTCTGCTCTTGCAGACAGCTGAGGACGCCAAGGAC
|
TTCATTCACCTCTGCTCTTGCA
|
TAAGGGGAGAGGTGTGGTGTAGG
|
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| chr15_1639 | chr15 | 89305611 | 89305748 | - | -59.8 |
CAAAGGGGGGTGGCAGAGGTGCCTGGGAAACCTGTGTCGGGCTGTGAGTGTTTTCTGGGACCTGATACTCACTGCACCGACCTGCTCTCCCAGGACAAGGAGCTCCGTGCTGTCTTTCTGCGGCTCTTTGCTCAGCTCCT
|
CTGCACCGACCTGCTCTCCCAG
|
GGGAAACCTGTGTCGGGCTGTG
|
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| chr15_1949 | chr15 | 76064806 | 76064904 | - | -39.6 |
GGTTGCTGTTGGCTGGGCCCTGAATGGTGGGCGGTGAAACAGAGAGCTTAGCATGGGTCTCTGACTCTGCCTCCCACAGAAGACGCTGGACAGCAGAGCAG
|
TCTGACTCTGCCTCCCACAGAA
|
TGGTGGGCGGTGAAACAGAGA
|
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| chr15_354 | chr15 | 41030824 | 41030963 | + | -57.4 |
CCCAAACACAATTTAACTGACAACTGAGTTGAAGGCAAAGGTAGTAATGTCTGACTTAGCTTTGCCTTCAGCTTAGTCGTCAGTTAAATTGTGAAGTTAGTAATTGAGATGTTTCAAGGTGATAATGTGGTACGTTCATT
|
TAGCTTTGCCTTCAGCTTAGTCG
|
ACTGAGTTGAAGGCAAAGGTAGT
|
Show |
| chr15_869 | chr15 | 82147691 | 82147830 | + | -73.5 |
GTGGCTGAGGAGTCGTGGGCGCCGCGGGGCCCGAAGCGGGGCTGGGGGCGTCGCGAGTGCCGCCAGAGGAGAAAGCGAGGCGGCTGCCTCCCTCGCGCGCCCACACGCGCTCTGGTTTGTCCGGTCTTCGCCGGCGTCCC
|
GGTTTGTCCGGTCTTCGCCGGCG
|
CCGCGGGGCCCGAAGCGG
|
Show |
| chr15_870 | chr15 | 82147620 | 82147759 | + | -72.4 |
CGGGCTGCCCGGGAGGTTCCCAGTTCTTCTGGCTCCAGAGTCTGAGCCCGGGTCGTGACGCAGGGCTCCCGGTGGCTGAGGAGTCGTGGGCGCCGCGGGGCCCGAAGCGGGGCTGGGGGCGTCGCGAGTGCCGCCAGAGG
|
GCAGGGCTCCCGGTG
|
CCGCGGGGCCCGAAGCGG
|
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| chr16_1137 | chr16 | 97877212 | 97877307 | - | -33.0 |
TAGTGAACCTAACGGAACCCCCCTTGGGGTGTGAGACTGGAAACATCACCATTGTTCTTTCTTGTCTTCCACTCTAGGTCTGTTGGGGATAGCAACCA
|
TGGGGTGTGAGACTGGAAAC
|
TTCTTGTCTTCCACTCTAGG
|
Show |
| chr16_1194 | chr16 | 92644380 | 92644484 | - | -45.7 |
GCTCACCTTGGGGGTGAAGGGAGAGGGAGGGGAAAGATAAGAAAAGTCCCCTCCACAACACGTTTTCTGATCTCTTCCCTCCCTCCTTCCCTGCCTCCCTCTCCTCC
|
CTGATCTCTTCCCTCCCTC
|
GGGAGGGGAAAGATAAGAA
|
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| chr16_1445 | chr16 | 64851425 | 64851562 | - | -70.7 |
TCCTAGCTGCGGGCGACGGCAGAGGGGGGGCCGGCGGCGGCGGCTGTGGCGGCGGCGTCGGGATCAGCAGCCGGGATTACTGCCGACGCTTCTGTCAGGTGAGGCGCCCGTCGGCCGCTCCGACTTGTCACTGGGCTCCC
|
GGCGCCCGTCGGCCGCTCCG
|
GGGGGGCCGGCGGCGGCGG
|
Show |
| chr16_1448 | chr16 | 64851402 | 64851539 | - | -70.7 |
GGGGGGGCCGGCGGCGGCGGCTGTGGCGGCGGCGTCGGGATCAGCAGCCGGGATTACTGCCGACGCTTCTGTCAGGTGAGGCGCCCGTCGGCCGCTCCGACTTGTCACTGGGCTCCCGGGCCTCTGCGTGGCTCCTGGCC
|
GGCGCCCGTCGGCCGCTCCG
|
GGGGGGCCGGCGGCGGCGG
|
Show |
| chr16_955 | chr16 | 84703313 | 84703452 | + | -81.7 |
CCGGTGCGCAGCGCCGGCTTCCTGTAcgcggccgccgccgcgggcgccTGGGAACACGGAGCGAGGGCAGCCGCGGCCCGGGACAGGGACGCAGGTAGGCGCGCGCTCCGAGGACGCGGGGTGCGGGTGCGGGCGGGGTT
|
GACGCGGGGTGCGGGTGCGGGCGGG
|
TGTAcgcggccgccgccgcgggcg
|
Show |
| chr17_1055 | chr17 | 78491532 | 78491639 | + | -25.5 |
tctaatGGGGCGGGCGGACAGACTGACGGGAGGGCCGGGCGGCGAGCAAGATGGCGCAGACTCAGGGCACCAAGAGGAAAGTCTGTTACTACTACGACGGGGATGTTG
|
GCGCAGACTCAGGGCACCAAGAGGA
|
CGGGAGGGCCGGGCGGCGAGC
|
Show |
| chr17_1667 | chr17 | 56749623 | 56749760 | - | -53.1 |
GGCCTGAGTGACAGCTCAGAAAGCTGGGAACCTGATGCTCACCACACAGCCTGCAGGGAGGATGTCAGGATGCAGACTGTCCTTTCCAGTGCCTCAGTTGGTCTGAGCATCTTCCAGGCAGACTGGTTTCCTGAGCTCAG
|
AGGGAGGATGTCAGGATGCAGACT
|
TTGGTCTGAGCATCTTCCAGGC
|
Show |
| chr17_1774 | chr17 | 47974142 | 47974279 | - | -58.0 |
CGATTGTTTAGTCTGCGCGGCGGGGCGGGCGGCCCGCGCGGTGGCCCCACATCTGGAGCCGCGGCCAGACGGGCCTGCTGGCGGCTGGCCGGGGTGCGTGTGCATTTTTAACTCTGGGATTTGCTGACAAGTTAAGAAGT
|
GCCAGACGGGCCTGCTGGCGG
|
GCGGGCGGCCCGCGCGG
|
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| chr17_1780 | chr17 | 47830105 | 47830242 | - | -45.6 |
GAGTGAAATGTGGGGTTCCAGACATCACTCTCTGGCCAGAAGTCCAGATCTTCTCTCTAGAGAGATGGTCATAGCCCAAAGGGCAGGGAACCCAGATCTACTATCTGCAATGACAGTGCTGGGGCCTAAACTTGGAGTCC
|
ATCTTCTCTCTAGAGAGATGGTC
|
TCACTCTCTGGCCAGAAGTCCA
|
Show |
| chr17_1781 | chr17 | 47830179 | 47830316 | - | -52.6 |
TGCCTGGAACACAAGACCTTTGTACAATCATTGAAGATGTGTGACCAGAGGCTTTGGATGTCTGGTCAGACAGAGAGTGAAATGTGGGGTTCCAGACATCACTCTCTGGCCAGAAGTCCAGATCTTCTCTCTAGAGAGAT
|
GATGTCTGGTCAGACAGAGAGTGAAA
|
TCACTCTCTGGCCAGAAGTCCA
|
Show |
| chr17_1939 | chr17 | 35893075 | 35893212 | - | -64.7 |
GGGGGAGACAGGCTTGCTAGGTCCTGGGAAGATTTGTGTTGTGTGGAGGGCCTTCGGTCTGACTGTAGCTTACCTCCCTCTGCACGATGCCTCTCCCCTTCCCAGGACCTTCGATGCCTTTTCCACCTTCTACCTGAATT
|
TGCACGATGCCTCTCCCCTTCCCAG
|
GGGAAGATTTGTGTTGTGTGGA
|
Show |
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