Results for Project: Pandis_et_al_rheumatoid_arthritis (d127912bb4a2)
(note: pri_sequences can be expanded by clicking on the entry)
| id | chr | start | stop | strand | energy | pri_sequence | star_sequence | mature_sequence | Secondary Structure |
|---|---|---|---|---|---|---|---|---|---|
| chr17_1984 | chr17 | 34845051 | 34845188 | - | -50.5 |
CGAGGGGCCTTCCACACCCAGGGGTAAGTTCAGGGCTGGGAGCAGAGACTGGGCCTGTGCGAGGTCTCACGCCACCCACCCTGTGCTCAGGTACTATGCTGCAGTGGAGGCCAAGAAAGAGAGGATGAGCAAGCACGCCC
|
CACGCCACCCACCCTGTGCTCAGGTACT
|
TAAGTTCAGGGCTGGGAGCAGAG
|
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| chr17_1985 | chr17 | 34845122 | 34845259 | - | -58.2 |
CCCTGGAGCACTATCTCTTCACAGGGAACAGCCCCAAGACGCAGGGCGAGCTCTTCCTGCTGCTGGACTCCCGAGGGGCCTTCCACACCCAGGGGTAAGTTCAGGGCTGGGAGCAGAGACTGGGCCTGTGCGAGGTCTCA
|
CTTCCTGCTGCTGGACTCCCG
|
TAAGTTCAGGGCTGGGAGCAGAG
|
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| chr17_2393 | chr17 | 12992031 | 12992168 | - | -75.5 |
CCAGCGCTGCGGCGGGAGGAGCGCGGGGGGGCCGGCGGCGGCGCGGCCTCGGCCTGTGTGACTGGCGGCGCCCGCGCAGCCTCGGGCTGGGAAGGTAGGTGCAGCCCGCAGCGGGAATGGCCACGAGGGCCTGTGGGGCC
|
GTGACTGGCGGCGCCCGCGC
|
GGGGGGGCCGGCGGCGGCGC
|
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| chr17_394 | chr17 | 27992364 | 27992492 | + | -54.6 |
CAAACTATAAGCCAGGTCACAAGTGACAATTGGGAAGGATAGAGACTTTGTCCTGGCTAATGTCACTGTGATATTTAGGTCACCAGTGACAATTGGGAAGGATAGAGACTTTGTCCTGGCTAATGTCGC
|
TTGTCCTGGCTAATGTCACTG
|
GTGACAATTGGGAAGGATAGAG
|
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| chr17_403 | chr17 | 28329054 | 28329156 | + | -51.8 |
ACCGCTCTAACCCCACCCAGCCCTCAGTGTTCCCGTGTGGCCTGGCCGCGCCCTAGGCGGGCACGGGGACACTGACGTGCCAGGGTAGTTCAGGAGCCCTGCT
|
GGCACGGGGACACTGACGT
|
CTCAGTGTTCCCGTGTGGC
|
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| chr17_511 | chr17 | 34024991 | 34025130 | + | -60.2 |
AGGTTTGGGGGCGGCGGCTCGGGACGTCCAGACGCAACTCTCGGCCGGAGCCAGAGACTCGAGAATTGCGTTTGGACAATCAGGAGCCGCGGCCCGGGACGGGGAGAGAAGCGCATCGGAGGCACCGGGGATAGAGACGC
|
GAGAATTGCGTTTGGACAATCAG
|
GACGTCCAGACGCAACTCTCGG
|
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| chr17_512 | chr17 | 34024917 | 34025056 | + | -76.0 |
TGAGATCCTAGGGCTGCGGCGGGGTCCCGGGTGTCCGGGGACCGTCCCGCGCTCCGCCCGGCCTCTCCCCCTCGAGGTTTGGGGGCGGCGGCTCGGGACGTCCAGACGCAACTCTCGGCCGGAGCCAGAGACTCGAGAAT
|
GGGTCCCGGGTGTCCGGGGACCGTCCC
|
GACGTCCAGACGCAACTCTCGG
|
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| chr17_789 | chr17 | 56011769 | 56011908 | + | -46.9 |
GGGCCTGGAGTCCTTGGCTGCTGAGAGTACTCAGGACGGGTGGAGGTGGGAAAGAGCCTGAGTTCCTAAAGCCCTGGGACCCTCCTGACTACTCCAGGAACCCCCACACTCTGGTAGAAGTAACATCCTTTGCTGCCATC
|
GGACCCTCCTGACTACTCCAG
|
GAGAGTACTCAGGACGGGTGGAG
|
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| chr17_802 | chr17 | 56358520 | 56358659 | + | -53.2 |
cctgagtgacagctcagaaagctgagaacctgatgctcaccgcacagcctgcagggaggatgtcaggatgcagactgtcctttccagtgcctcagttggtctgagcatcttccaggcagactggtttcctgagctcagct
|
agggaggatgtcaggatgcagact
|
ttggtctgagcatcttccaggc
|
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| chr18_620 | chr18 | 60953852 | 60953991 | + | -54.4 |
TGAGGTCTCACCTGTGCCCTAGGTGAGCTCTTGGTACCTTGGCGACAAGAAGGTGAGCCCAGGAACAAGGTCTCAGTCCGAGGGCAGGGTGGCTTTCCGCAAGGGTCTGCTCTCGTTGTGGTAACAGACCACGCTCGGGA
|
CCCAGGAACAAGGTCTCAGTCCG
|
GTGAGCTCTTGGTACCTTGGCG
|
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| chr19_1286 | chr19 | 36736536 | 36736673 | - | -60.0 |
TTGCCTGCGGTCAGTCGGCCGGCTGGACCGCGGCGCTGCATCCTCTTAAGTACTGAGTGCGAAGTTGCTCAGGGTGCGGTTGTCGCGGTCGCCGCTGCCTCTCGGTCCAATGAGCTGCACCAGGTAGGTTCAGTGCAACT
|
CGGTTGTCGCGGTCGCC
|
GGACCGCGGCGCTGCA
|
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| chr19_1680 | chr19 | 6960174 | 6960311 | - | -53.8 |
AAGTCCTTCGAGGCTGCTCGAAGTGAGTGGGGATGGGTGACTGGGAGCTGGCCCTGCCAGGCCTTGGCTGCTCTTACATCCCTCCTCCTCCCCCAGAAAGGAACAAGTGCTTCGAGATGTCATCCTTCGTGGAGACCAAG
|
CTGCTCTTACATCCCTCCTCCTCCC
|
GAGTGGGGATGGGTGACTGGGAGCT
|
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| chr19_1749 | chr19 | 5678955 | 5679092 | - | -58.9 |
GTCTTGTGGGAATGGAGGAACAGTGGGACAGGGTGACAGGGTGAGACCCATAGATCAGAGCTGGGCTTCACCCATTTCTCCCTGCTTCCAGCTGCCACCAGCCCACTCACTGCGGTCTTCAGCCTCACGCGAAGCCTGCT
|
CACCCATTTCTCCCTGCTTCCAG
|
GGGACAGGGTGACAGGGTGAG
|
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| chr19_1796 | chr19 | 4623835 | 4623972 | - | -51.5 |
GGGCTAAAAATGGGGCTTTGGGTGAGGGGAGCTAGGTAGAAAGCCAGAGGCATATGTGGTTTTCACCTTCCTCCCAGCCCATTTTCACCACATTATTGAGCAGCTGCGCTTCCGCCAGAGCAGTGTGGGAAGTATCTTCG
|
GGTTTTCACCTTCCTCCCAGC
|
GGGGAGCTAGGTAGAAAGCCAG
|
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| chr19_1822 | chr19 | 3921787 | 3921885 | - | -33.3 |
AAAGGATAAAGAGATGCAGGACCTACAGGAAGGAAGTGATACCGGCCCAATTCGGCCCTGACTCTCATTCCTTTCTGTAGTCAGCCTTCGAGGCCGAGGTG
|
TACAGGAAGGAAGTGATACCG
|
GACTCTCATTCCTTTCTGTAGT
|
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| chr19_838 | chr19 | 58486876 | 58487015 | + | -52.3 |
GGCCAAACTTCTGAGGCCAGCACAAGAGGGAGGATTGAAGCAATTATTGAGAAAATTGTCTCAATCTTTCCTTTTCTCTTGGCCGTGGAAATCTGGCCATTTTTGTCAGAGAAGAAAGTCTTGAATCCAGAGACCACACA
|
ATTGTCTCAATCTTTCCTTTTC
|
AGAGGGAGGATTGAAGCAATTA
|
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| chr1_2813 | chr1 | 134946183 | 134946320 | - | -54.5 |
GAGCAGTCAGTGCTCTTAACTGCTGGGCCATCTCTTTAGTCCAGAAATACTTTTTATGAAACAAATCAGGGCTAGTGAGATGGCTCAGCAGGTAAAGATGCAACTCACCTTTGGATGAGAAGAACCAGCTCTCACCAGTT
|
CAGGGCTAGTGAGATGGCTCAG
|
GGGCCATCTCTTTAGTCCAGAA
|
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| chr1_3197 | chr1 | 92464462 | 92464599 | - | -51.1 |
TAGACACACACAAGGTCTGTCCTGTGGGCAGTGGTTAGGTTAAGTCTTGGTATAGATCCTCATGTGCCAGGAGAAGCCTAGAGCCGTCTGGACTCTGATGGTGATGGGCTCTCTTGTAGGTGTGGACCACTATAATGAAA
|
TGCCAGGAGAAGCCTAGAGCCGT
|
GGTGATGGGCTCTCTTGTAGG
|
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| chr1_3352 | chr1 | 80589066 | 80589203 | - | -49.9 |
GAATGTGTGCGCTCGCATCTGGTGTTGTGTGTGGATGTGTGTGTGGATGCATACTTAAACAGGAGTCAGAACACACACACACACACACACACACACACACACACACACACACACGGAGGCCAGATGACAATGCTGGGTGT
|
CACACACACACACACACACA
|
TTGTGTGTGGATGTGTGTG
|
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| chr1_4064 | chr1 | 18412463 | 18412600 | - | -50.2 |
CTCTCTATCTCTCTCTCTCTCTCTCCTCTTTCGTATAGAATAGAGTTTATTCATGCCATGGGGAGGGGAGTTGAGAGAGAGAAGAGAAGAGGAGGGGAGGGGAGGAGAAAGAGAAAAAAGAGAAGAGGCTGGCCATGAGC
|
CATGCCATGGGGAGGGGAG
|
CCTCTTTCGTATAGA
|
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