Results for Project: Pandis_et_al_rheumatoid_arthritis (d127912bb4a2)
(note: pri_sequences can be expanded by clicking on the entry)
| id | chr | start | stop | strand | energy | pri_sequence | star_sequence | mature_sequence | Secondary Structure |
|---|---|---|---|---|---|---|---|---|---|
| chr3_2516 | chr3 | 95929998 | 95930135 | - | -79.6 |
CGCGCGCCACGCGGATCGCGGCCCGCGCCGTCGGGTCCCGGGATTCCGCTGCGGCCCCGGCCGCGGCGCGTGCTGCCCGCGAGCGGGCACGGTCGGAGGGAGCGTGGGGCACAGATCGGCGCGAGTCCCACACCCGGGGC
|
GGGGCACAGATCGGCGCGA
|
GCGCCGTCGGGTCCCGG
|
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| chr3_2633 | chr3 | 89116589 | 89116726 | - | -46.1 |
GCCATCTTGAAGTCCTGGTCTGGAAGGTGTACACCTCCTGAGGCAGCCCTTCAACCCTGGAGCCCCAGAATGAAGATGCAGCTTTAGAATTTGGGTGGTCTATCTCGCTGGGGCCTCCAGAAAATGTGAATCCCACTGAG
|
GGAGCCCCAGAATGAAGA
|
ATCTCGCTGGGGCCTCCAG
|
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| chr3_2819 | chr3 | 69593500 | 69593637 | - | -54.8 |
AAGGCTGTTGGAAATGTCTGGGGAGGAATCTGGAAAACATGGGCGTGACGTGCATGGAAGAGAGTGGCGCCTGTGTCCAGGTTTTCCTTTGACATTTCTGGTTCAACTCTGACGGCTTTTCATCCCTGAGGAAAAATAAT
|
CGCCTGTGTCCAGGTTTTC
|
GGAATCTGGAAAACATGGGCGTG
|
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| chr3_3194 | chr3 | 30351901 | 30352038 | - | -62.8 |
CTGGTCACAGGAGTGTGAGATGGCCCACTCTCTGGTCACAGGAGTGTGAGATGGCCCACTCCCACTCCCTGGTCATGGGAGTGTGAGATGGCCCACTCCCTGGTCACGGGAGTGTGAGATGGCCCACTTTCTGGTCACAT
|
CTCCCACTCCCTGGTCATGGGAG
|
CCCTGGTCACGGGAGTGTGAGAT
|
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| chr3_508 | chr3 | 65659307 | 65659446 | + | -62.6 |
TGTCCTTGTCGCCGACTTGCGTGTGCCTTGCAACTTCCGAGCCGGAAACTTCCTGGCCGGCTAAGGAGCAGGGCACCCCCTCCGGCTAGAGAAGGCGTCCGGAATAGGATTCCTCCGCGGATTACGCGGCGCCATCGGCA
|
GCCGGCTAAGGAGCAGGGCACCC
|
GTGCCTTGCAACTTCCGAGCCG
|
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| chr3_882 | chr3 | 93297745 | 93297884 | + | -47.2 |
gaaacctccttcttaaaaacatcatgtggaagggtatgacttccaaattcaAGCCCACGAGCTTTTCCACCCTTGCCATCTTCATCCCATTCCCTGAAATGTGCGGGGTGGAGCAGCAGGGGCTGAGTGGCCACAGGCAG
|
CTTTTCCACCCTTGCCA
|
GCGGGGTGGAGCAGCA
|
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| chr4_1268 | chr4 | 130071746 | 130071885 | + | -52.2 |
CATTATCTATGTGTCCCACTCACTGATTGTGTCATACCAGCTGTGTGTCACACTCAGCAGCTGTGTGCCACACTCAGCAGCTGTGTGTCACACTCACCAGCTGTGTGTCACACTCACTAATTGTGTGTCAcactcaccag
|
CAGCTGTGTGTCACACTCACTA
|
CTGATTGTGTCATACCAGCTGTG
|
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| chr4_1378 | chr4 | 135160778 | 135160917 | + | -53.4 |
AATAAGATTGCCTGTGTCCTCTTGGAGAGCAGGACTGTGAAAACTGGCCCTCTTCTTAGGGCACCATTAACATGACCTGTCTCCAGTAGCCTCCTGGGCATCTCTGGGGGCCACTCCAGAGAGACACAAATGCCTGGGCT
|
CATGACCTGTCTCCAGT
|
TGGAGAGCAGGACTGTG
|
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| chr4_1708 | chr4 | 152274079 | 152274218 | + | -78.2 |
AGAGGCATGCGCCCTGGTCCGCCCCCCGCCCCCGGTCGCCCGAGAGCAGCCAGCTGAGCGGCGGGAGCCGAGTGCGGCCGCGGCGGAGGCGGCGCCCAGGGAGGGAGGGCGGCGGGGCCAAGCGCAGCGCAGCGCTCTGG
|
CCCCGCCCCCGGTCGCCCGAG
|
AGGGAGGGAGGGCGGCGGGG
|
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| chr4_264 | chr4 | 41140147 | 41140254 | + | -50.2 |
gtggtagtctcagtgccatcctgtgctacaggatgagatccggtctcaaaaaaTTAtttttggagaggatctggttctgtagctcacgatgacctgaaactcactatg
|
tgctacaggatgagatccggt
|
aggatctggttctgtagctca
|
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| chr4_322 | chr4 | 44591008 | 44591147 | + | -47.5 |
GCCAGAAAACTTCAAAATTCTTCTCAGGATCTTGATGGTAGGGGTCAAGGACTCTCCCCAGGACTGGCAGGCAGGTCGGCAGGTACTCCCAAGTCTTGATGGAGGTGCTCTGCGGCTTCACACTGGGGGAGATCCCTGGG
|
TCGGCAGGTACTCCCAA
|
GGAGGTGCTCTGCGGCT
|
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| chr4_356 | chr4 | 48213086 | 48213225 | + | -81.6 |
acctagccagctatccacagctggtgaggtcacggaacctagaagagaacttactgcttccactttcctatagaatgcagttagaaattaaactataggaaagtggaagcagtaagttctcttctaggctcatcactaag
|
cttactgcttccactttcctat
|
aggaaagtggaagcagtaagtt
|
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| chr4_843 | chr4 | 101420103 | 101420242 | + | -70.8 |
TACGTGCCGCGGCGCATGCAGCCGGCCGCCAGCCTGCCCGCCCGCCCGCGCTGCTTAACCGCGCCCGGGGGAGGCCGAGGCTGCTCGGCAGCGCCTCGGACTGCACTGGCCGCACGCGCGTGGGAAGGGACCCTGCACGG
|
CCGCGGCGCATGCAGCCGGC
|
CGGACTGCACTGGCCGCACGCG
|
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| chr5_1233 | chr5 | 115578940 | 115579079 | + | -53.6 |
AAGCATGCTGTGGACGGTGCTGTGAAGAAGCTCACTAAGCTATGGAAGGAGGTAAGGGAGGGGGTGGCGGGAGATAGACTGCGCCATCTCTACCTCCGCTGCTGTCTGACTCCCCGGCCACCCACTTCCTCTCCAGAACC
|
GGAGATAGACTGCGCCATCTC
|
CTCCGCTGCTGTCTGACTCCCC
|
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| chr5_163 | chr5 | 24427440 | 24427579 | + | -47.6 |
CAGCCGAGGCTCCTTTCCTTCCTGGAGTGGGACCGGGCTAGCCTACTCTTCAGCGATGGTGACTAGCCCTTTCCCCCACTCAGGTTATGCCTCCACCTTGTTGCCCTGAAAGCCGAAGCGACAGCGAGAAGGGCTAAGAT
|
TAGCCCTTTCCCCCACTCAG
|
GAGTGGGACCGGGCTAGC
|
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| chr5_1725 | chr5 | 141789027 | 141789166 | + | -56.7 |
acgaacatttgggtgagtgtgtgagtgtgtgtgtgtgagtgtgatatgaatgtgcatgcacatatgtgtgtagatgcatgtgtgcatgcatgtgtgcattatcatgtgtagatacatgcatgcatacatatgtgtgtatt
|
tcatgtgtagatacatgcatgcat
|
gagtgtgtgtgtgtgagtgtgata
|
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| chr5_1791 | chr5 | 144255562 | 144255663 | + | -60.4 |
CAAGCACCGCGCTGTCCCCGGCGCGGGCCTGCCGGGGGGGCAGCTGCTACCCGGAGCGCCCTGCCCGGCCAGGCCCTGCCCCGGTGGCCGTGAACTTAGTGT
|
CGCCCTGCCCGGCCAGGCCCTGCCC
|
GCGGGCCTGCCGGGGGGGCAGCT
|
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| chr5_2430 | chr5 | 125094291 | 125094428 | - | -74.0 |
GAGGTATGCAAGTCAAGAGTCTTTGGTTTGACATGTGACAGGCGGGAGATCAGTTGCCGCCTGCCACATGTCAAACCAAAGACTCTTGACTGGGAGGTATGCAAGCTCTACACTGTGTGCCCGTTGCGAAATAGGGTCTC
|
CGCCTGCCACATGTCAAACCAA
|
GGTTTGACATGTGACAGGCGGG
|
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| chr5_2432 | chr5 | 125056974 | 125057111 | - | -63.0 |
GTGGCAGCTGCTGCTGGCGCGGGTGGAGGGAAAGGTCAGGGGCTGAGTTACACTTGATCCTGAGCCCTGGCCCTCCCTGCCTCCTGTCCTTGAGGAGCCCTGAGAAGCTGCTCTGGAGCCACGTGGCTCTTGTGGTCACT
|
GAGCCCTGGCCCTCCCTGCCTC
|
GGAGGGAAAGGTCAGGGGCTGAG
|
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| chr5_3245 | chr5 | 65319859 | 65319996 | - | -75.7 |
TCACCCACTTCTGCCTCAAAAGCACTAGGATTAAAGGTGTGCGCTGCCGGGCATGGTGGCGCACGCCTTTAATCCCAGCACTCAGGAGGCAGAGGTAGGCGGGTTTCTGAGTTCGAGGCCAGCCTTGTCTACAGAGTGAC
|
TGGCGCACGCCTTTAATCCCAG
|
AGGATTAAAGGTGTGCGCTGCC
|
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