Results for Project: Pandis_et_al_rheumatoid_arthritis (d127912bb4a2)
(note: pri_sequences can be expanded by clicking on the entry)
| id | chr | start | stop | strand | energy | pri_sequence | star_sequence | mature_sequence | Secondary Structure |
|---|---|---|---|---|---|---|---|---|---|
| chr5_3501 | chr5 | 33618109 | 33618246 | - | -46.0 |
TATTTCTGTGTACATGTGTGTGCATTGCTTGTAGAGGCCAAAAGAGAGCATCAGATCCTCTAGGACTGGAGTTTACAGAAGGTTGTGAGCTGCCCTATGAGTTCTAGGCATTGAATCTGGGGCCTCTGGAAGAGCAGTCA
|
AGAGCATCAGATCCTCTAGGACTGGAGT
|
ATGAGTTCTAGGCATTGAATCTGG
|
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| chr5_362 | chr5 | 34574130 | 34574269 | + | -58.9 |
TTCCCAGGATGGCCCGGACGGACGCGGGGTTCTCTGTGGAAGCGGCTTGCTCGGCTCTGAGCTTCCTGGTGGGCCTCGGGGTCCTCCCGGGTCAGCATTGTGCTAATGGTGGCTCCAAATGCTGGTCACTGCAGAGATTG
|
CTTCCTGGTGGGCCTCGGGGTC
|
CGCGGGGTTCTCTGTGGAAGCG
|
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| chr5_363 | chr5 | 34574056 | 34574195 | + | -70.2 |
GTCGCTGCGGCGCGGGGTGCCCGGGGTCTAGGTGCTTGCCTCCGAGTGCGGGGGCGAGGACACTGCATCGTCGCTTCCCAGGATGGCCCGGACGGACGCGGGGTTCTCTGTGGAAGCGGCTTGCTCGGCTCTGAGCTTCC
|
CTTCCCAGGATGGCCCGGACG
|
CGCGGGGTTCTCTGTGGAAGCG
|
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| chr5_918 | chr5 | 90969020 | 90969159 | + | -66.3 |
cacaggtcaaggaggccatctgattgtgggctgaaacttctaaacttatgagcccaaacactttctctcAAATGTTTGTTATAGTAATGCAAAATTTGAGAGAAATGTTTGGGCTCATAAGTTTAGAATTTTTTTCAGTA
|
agcccaaacactttctctcAAAT
|
TTGAGAGAAATGTTTGGGCTCA
|
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| chr6_1319 | chr6 | 120437594 | 120437695 | + | -33.0 |
TAAAATTTTGCCACAgtgatcccaacactctggaggctgagacaagaggatctcaagtctgagcctggcagagtgctgtactgaaagatgaagatgaggcta
|
caacactctggaggctgagac
|
ctgagcctggcagagtgctgta
|
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| chr6_2455 | chr6 | 87191747 | 87191884 | - | -55.1 |
ACAGCACACGGCTGTCAATGGTGAACAAGTGAGAGATTGTTAGATAGGAAAACCAAGCCTATCTAACAATCTCTCACATGTTCAAAGTGGTATAGCTTACCAGGGCCCTTCTCCCCAGTGACATCATACAAATTATGTTC
|
CTATCTAACAATCTCTCACATG
|
AGTGAGAGATTGTTAGATAGGA
|
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| chr6_437 | chr6 | 42350866 | 42351005 | + | -55.7 |
GATTAGGGGTTAAAGCAGTCGTCTGAGGAGAGGAGGAAAGAGGGTCGGTACTGATAGCCTTTTCTCTCCTTCCTACCCAGACTTTCCTTTGCCCCCTCCTCCCCTTATTGGGGAGGGCGACGACTCAGAGGGTGCCCTGG
|
CTTTTCTCTCCTTCCTACCCAGAC
|
CTGAGGAGAGGAGGAAAGAGGG
|
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| chr6_681 | chr6 | 71271723 | 71271862 | + | -61.9 |
cggcggcagcggTGTCTCTGCCTCTCCGCCACCTCCACCGCAGCCTCTGACCCCCGGCCGGCGTTGTTGGCGGGGAGGGGGACAGTAGTTGTAGACGCCCGCCCCTGCCTCAGAGAAGGTGAGTTcccgcccggcggcgg
|
GCCGGCGTTGTTGGCGGGGAGG
|
TCTCCGCCACCTCCACCGCAGC
|
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| chr6_682 | chr6 | 71271650 | 71271789 | + | -61.3 |
CTTCCCCTCAGGAAGTCAGGTCTCCGCCTCCTCCCCCCCTCCCACCCCGCCTGCTCTgcggcggaggcggcggcggcggcagcggTGTCTCTGCCTCTCCGCCACCTCCACCGCAGCCTCTGACCCCCGGCCGGCGTTGT
|
Tgcggcggaggcggcggcggcgg
|
TCTCCGCCACCTCCACCGCAGC
|
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| chr7_1212 | chr7 | 110062097 | 110062220 | + | -73.2 |
TCGGGAGCCGGGAGGCTCAGCTCGACCTGACCTTCGCGCGGAGCGAGTCCCTGGGCGCTCGCTCGGTGTGGAAGCCGGTCGGACTGGGCCTCCGGGCCTCGGTTCTCAGCAGGCCCCAGCAGGG
|
TCGACCTGACCTTCGCGCGGAGC
|
TCGGTGTGGAAGCCGGTCGGAC
|
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| chr7_1424 | chr7 | 123220004 | 123220143 | + | -48.3 |
GCAGGCAATGGGCAGAAAGGAGCCCGGTGGGGGGCGGGGCTGGGGACACCGATGGCCCCGAGGGTTCAAAGCGAAGGCCGCGGTCCTTTCTCCCTTCTTGCTTCTTTTCCTTTTCTGAGATTTTCTAGATCCATCCATCA
|
TCCTTTCTCCCTTCTTGC
|
CCGGTGGGGGGCGGGGCT
|
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| chr7_1759 | chr7 | 142477007 | 142477146 | + | -46.1 |
GAGCCCAGTCCCCACCGGAAGCTTGGTGATGAGGATGCTGAAGGCAGTTCTGAACAGCAGAGCTCAGGCACCAGGGAAGTCTCATGCCTGCTGTGCAGTTGGCCTCCGCCTGTGACAAGTCTGGTCAGTGACACGGAGGA
|
CCCAGTCCCCACCGGAA
|
TTGGTGATGAGGATGCTGAAGG
|
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| chr7_1760 | chr7 | 142476936 | 142477075 | + | -47.2 |
CAGAGCCTTGCCTCGTGAGCGCTGTGAACATTCTGCCAGGGCTGTCTGCTGCTGTGAGCCACGGTCTCTCTGAGCCCAGTCCCCACCGGAAGCTTGGTGATGAGGATGCTGAAGGCAGTTCTGAACAGCAGAGCTCAGGC
|
CACGGTCTCTCTGAGCCCAGT
|
TTGGTGATGAGGATGCTGAAGG
|
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| chr7_1932 | chr7 | 138525570 | 138525707 | - | -48.4 |
GCTGCTCACACACAGGCAGTTGCACGGGAGACTGTGGAGGCTCACGTTTCCAGCCTCACCTGGGGAGGAGGAGTACCATAGAGTGTTCCCGCAATGCTCTGGAGCTGTGTCTTCTCTGAAGCAGACATCACATGACCCAG
|
TACCATAGAGTGTTCCCGCA
|
CGGGAGACTGTGGAGGC
|
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| chr7_2318 | chr7 | 112428144 | 112428281 | - | -54.7 |
GGGCTCTGGGACAACAGCCACCCAAAGCCTGGGCTCCGCCTGTGGACCAGAGATGACACCGACCCGGTTAGGGCTTTGGAGGCGACATGGGGACACTGAGAGGCGCGCCCAGGCACTGCCAGGGGGGTCTCCCACTTCCA
|
CACTGAGAGGCGCGCCCAGGCACTG
|
AAGCCTGGGCTCCGCCTGTGGA
|
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| chr7_2319 | chr7 | 112428218 | 112428355 | - | -56.8 |
CAAATGCCAGTCCTCGGGCGCGCAGAGGGCGGGGACAGCGGCCTAGGGGAGAGCACAGGGGACCGGCTGGGCCTGGGCTCTGGGACAACAGCCACCCAAAGCCTGGGCTCCGCCTGTGGACCAGAGATGACACCGACCCG
|
CCGGCTGGGCCTGGGCTCTG
|
AAGCCTGGGCTCCGCCTGTGGA
|
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| chr7_2910 | chr7 | 66381647 | 66381742 | - | -34.3 |
AATGGAGAATATCTTAAAGGGCCTGCAGGAGAGGACTCAAGTTGGAAAACGTTCTAATTTGATGTCTTTCTCCACCAGGATGAGCGTGTGTCTGCAGC
|
GCAGGAGAGGACTCAAGTTGG
|
AATTTGATGTCTTTCTCCACCAG
|
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| chr7_3073 | chr7 | 45012368 | 45012505 | - | -49.2 |
TTGGTGGGTCCTGAGAGGCTGGAACTAGGAAGGTGGTTGGGCTGAGTACTCACAGAACAGAGTCCAACTTGGCCCCTTCCAGGTATTGGACACAGCTGCAGATAGCTTCCTTGTGGAGCTGGTGAGCATCCTGGATCCCC
|
GTCCAACTTGGCCCCTTCCAGG
|
AGGAAGGTGGTTGGGCTGAGTACTC
|
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| chr7_3327 | chr7 | 28365560 | 28365697 | - | -45.5 |
AGGAGTCTGGTAAGAGAGTGACCAGAATCAGTGATGGATTAAGAGGCAAAACAGCTGGTGGGAAGCGTCTTTGTGGCAGATGGGAGCCCCGGTATTTTCTGAAGGGCGCCTGTGCAGGACGCGCTCAGCTTCCTGCCCTC
|
CTTTGTGGCAGATGGGAGCCCCGGTA
|
CTGAAGGGCGCCTGTGCAGGAC
|
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| chr7_353 | chr7 | 30552775 | 30552914 | + | -73.8 |
gggggccAACCTGGAGTGTTCATGCTCATGCCCCCTGGCCGCTGAGCACCCCAGGCTGAGTCAGAGGCACAGAATTAGGCCCGACCTACTCTGGGGTAGGGTCTGTTCTGTGTCCTCCTGACTGCCTGGCATGGGTGCAG
|
GGCACAGAATTAGGCCCGAC
|
AGGGTCTGTTCTGTGTCCTC
|
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