Results for Project: Pandis_et_al_rheumatoid_arthritis (d127912bb4a2)
(note: pri_sequences can be expanded by clicking on the entry)
| id | chr | start | stop | strand | energy | pri_sequence | star_sequence | mature_sequence | Secondary Structure |
|---|---|---|---|---|---|---|---|---|---|
| chr7_468 | chr7 | 40917938 | 40918077 | + | -54.1 |
tacagcacctacctagaagccccagtgaggggctggggagtgtggttcagtgctagtgctcctgccttgaatcactagccaggggctggaagtttagtttaatggtagagcactcgcctagaatgcactagtgaggggct
|
ctagtgctcctgccttg
|
tggtagagcactcgcc
|
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| chr7_601 | chr7 | 49263187 | 49263326 | + | -45.5 |
AAGGGGCATCGGCTGTGGTTCTAGCCATGATGATTTCTGAGTGCTTCGCTGTGGCCACATCCTGGCGAGTTTCATGGTCCCTGTCCCTAAGGCCTTAACACATGAGTAAGCGCATGTGCAAGCTGCCACACTTTGACAAA
|
CTGTGGCCACATCCTGGCGAG
|
AGCCATGATGATTTCTGAGTG
|
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| chr7_743 | chr7 | 67039958 | 67040097 | + | -46.2 |
GGGGTTTTCGGCAGTGTCAGCTCAGGGGTCAGAGCACTGGGAGCGTTTGGTGAATATGGCTTTTCTCACACCCCAGCTCCGTCAGGATCTTGgctgcctttcatggtgcttggggtggaaggtggatattagcttccgcc
|
TGGTGAATATGGCTTTTC
|
GGGGTCAGAGCACTGGG
|
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| chr7_894 | chr7 | 80401207 | 80401346 | + | -52.8 |
CTGACTCACCCTCTGAGTCCCAGTTGTCTCAAAACCAGGAGACTGGATATATTTCTAGCCTCTCTGGGTCAGTTTTGCCCAGCCATCAGTGCTGGGCCTGACTAGAGAATAGGCTATAGTACTGTCCTAGCTCTTTTCTT
|
GCCTCTCTGGGTCAGTTTTGCCCAG
|
GGGCCTGACTAGAGAATAGGCTA
|
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| chr8_1275 | chr8 | 108778829 | 108778933 | + | -33.1 |
GTTCAGGGGCACTTGTGAGCTCCTCTTTCTGTTTTGCTAGTGAACTTGGCTTTGATAACCTGTTCTGGCAGACAGAAAGCACAGTCCACTCTCATATTCCCTGAT
|
CTGGCAGACAGAAAGCACA
|
CTCTTTCTGTTTTGCTAGTGAA
|
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| chr8_1475 | chr8 | 120538675 | 120538814 | + | -69.0 |
TTTACAGCCGCCCCCACCCGCAGGCGGGGAACCTGAGGCGCAGGCTGTGTCTGACTCAGCCACTCAGTCGCCCCGCCACAGGTGAGGGGGGCCGGGGCACAGGCTCCGACTGGCAGCGTGTGTCATCTGCTATGCTGGGT
|
GCCACTCAGTCGCCCCGCCAC
|
GGCGGGGAACCTGAGGCGCAGGCTG
|
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| chr8_1476 | chr8 | 120538606 | 120538745 | + | -52.0 |
CTGGCGAGCAGCCTTCCCTGGGCGTCCGTGTTACTTAAGCTTGGCTACTTAAGTGTTGCTTAGCCTGTGTTTACAGCCGCCCCCACCCGCAGGCGGGGAACCTGAGGCGCAGGCTGTGTCTGACTCAGCCACTCAGTCGC
|
GCCTGTGTTTACAGCCGCCCCCACCCG
|
GGCGGGGAACCTGAGGCGCAGGCTG
|
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| chr8_906 | chr8 | 84005611 | 84005750 | + | -61.7 |
gcctcgaactcagaaatccacctacctctgcctcatgagtgctgggattaaaggcgtgcaccaccacgcccggcGAGATACTAATTTTTATACAccgggcatggtagtgtacacctttgatcatagcactcagagaaact
|
cgtgcaccaccacgcccggc
|
cgggcatggtagtgtacacc
|
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| chr9_1113 | chr9 | 94751808 | 94751947 | + | -74.0 |
CAACCTCACAGGGCAGAGGGCTGTGGGATCAGATAGCCTGTTAGTGTTATCCTACACTGGTACAGGCTGTCTGATCCCACGGTCCTCTGTCTTTAGACttttttttttttttttttataGcattgggtgcccgtgtgaag
|
CTGGTACAGGCTGTCTGATCCCAC
|
GGGATCAGATAGCCTGTTAGTG
|
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| chr9_1914 | chr9 | 107541846 | 107541983 | - | -46.3 |
TGGGGAGGCAGTGTGCAAAGAAATTCACGCTTAGGTAGGGAAGCAGCTGGGAAATACAATTCCCGTAGTGCTCCACGCCTTCCGTTCCGGCTAACGATGACGTGCTGCATTCTGGGATTTGTAGTCTTCCTCCTCCCACT
|
TTCCCGTAGTGCTCCACGCCTT
|
GACGTGCTGCATTCTGGGATTT
|
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| chr9_2611 | chr9 | 57420612 | 57420749 | - | -47.0 |
GCCAGGCACGGAGTGTGGGCCTCATAGGGCTGTCCTGCCAGGACGTTTAAAACATTTCTGGCTGGGCTGCCCTTCTCCCCCTCCCCCTCCCTCTCCATTTCTCACCGCCCCAGAGTTCTTCTACTGGCTTGGACAACCCA
|
TTTCTGGCTGGGCTGCCCTTCT
|
TAGGGCTGTCCTGCCAGGACGT
|
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| chr9_3087 | chr9 | 22113894 | 22114031 | - | -50.3 |
CTGCTGGTTGCCTCTGGCCTGCTTCTAGAGGATAGAGGTAGAGAGTGGCCAGCTGCTGCCAGCCTCTGACCCCTGTCCTCTGCACCACAGGTTTTATTCCCTCTGCAGTTATGGGACGAAGAAAGTCCAAACGGAAGCCG
|
CAGCCTCTGACCCCTGTCCTCTGC
|
AGAGGATAGAGGTAGAGAGTGGC
|
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| chr9_358 | chr9 | 40696205 | 40696344 | + | -58.4 |
CACTCTGCACCCTTTCTGGAGCCAGGCTGCTGGAGTCTGGGTTGTTCTCTGAGGCCCAGTCTCCATCTGCCTTCCTCTGGGGGGTGAGTTCTATCTTCCATCCTTCAGCCAACAGCCAGGGGCAGCAGGCTTTGCCCTGC
|
CCCAGTCTCCATCTGCCTTCC
|
CAGGCTGCTGGAGTCTGGGTT
|
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| chr9_360 | chr9 | 40730929 | 40731068 | + | -64.3 |
GCCCGGGTGGCCACCCTCGGGAGTGGCTCTGATCTTTGCCTTGCAGATCTATAAAACTGCGGCCATGGCAGGGCAGCTCCGGGAGGGAGGCTGCAGGCTGCAGGAGGCACGGGAATTCGGGCTGCTGCAATTTGAGTCTC
|
CGGCCATGGCAGGGCAGCTC
|
GTGGCTCTGATCTTTGCCTTGCA
|
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| chr9_623 | chr9 | 57137392 | 57137531 | + | -55.0 |
ACCGCAGACTATCCCCAGGGGACACGGGGACTTGGCTGAGGCAGCTCCACTGAGAGCTGAGAGCCTTATCCCCGCAGTTCTGGCTGCCAGACACGTTTGGCTACTCAGCACAGCTCCCCCAGATCATGCAAGGCTGTGGC
|
TGAGAGCCTTATCCCCGCAG
|
ACGGGGACTTGGCTGAGGCAGC
|
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| chr9_629 | chr9 | 57141895 | 57142034 | + | -55.6 |
GCCTGTTCAGGAGGCCACCCTGTGAGTGGAGACTCGGTAGAGGTAGAGGTGGGAGTCCTGCCCTTGTCGGTCCTCATGGCCTCTCCTGTTCTCCATCTAGTTGTGACCTCCTGGAGCAGCGAGACCCCACTGGTCACCTT
|
GGCCTCTCCTGTTCTCCATCTA
|
GAGTGGAGACTCGGTAGAGGTAGA
|
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| chr9_983 | chr9 | 78462637 | 78462776 | + | -63.2 |
AGAAAACATTTTTGTTCCAGGAACAAGGAAGggaggtgtgtgtgtgtgtgtgtgtgtgtgtgttcgtatgtgtacatgtgtgtacatgtgtgtacgtACACACTCGGACGCACACGCATTCACGCCTTATGCAGTCTGAG
|
tgtgtgtgtgtgtgttcgtat
|
acgtACACACTCGGACGCACA
|
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| chrX_1595 | chrX | 74274062 | 74274199 | - | -45.6 |
CTGGTTCCTCTCCACACCACTCCCAAGGATGTTGAGAAGGAGCTGAATGCCCTCTATGATGTGTTTCTGGATGTCTACCAGCGCTGGCAGAATGAGGTAGGGGTGATAGATTCCATGGCAGAGGGGATGGTGCAAATGCC
|
TGATGTGTTTCTGGATGTCTACC
|
TAGGGGTGATAGATTCCATGGCA
|
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| chrX_1700 | chrX | 58038613 | 58038750 | - | -74.5 |
CTTTGCGCCTGCGCGCCGCGACCGCGGGCGTGGGGGTGGGGGGAGTCCTAAAGTCCCCGGCCTCGGCTTGAAAAGGCCGAAGCCACGGGGAGCAGGGGCGGGGTTGAAGCCCGGACCGGAGCCTCCTCTTTCCTCCCTGC
|
TTGCGCCTGCGCGCCGCG
|
CGGGCGTGGGGGTGGGGGG
|
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| chrX_1701 | chrX | 58038690 | 58038827 | - | -64.9 |
GCCGCCCTCCCCGCTAGGCTGCTTTCAACCTCCCCCGCAACCCCCTGGCCGCAAAATCCTGCTCGACGGCTGCAAGGCTTTGCGCCTGCGCGCCGCGACCGCGGGCGTGGGGGTGGGGGGAGTCCTAAAGTCCCCGGCCT
|
CCCGCAACCCCCTGGCCGCA
|
CGGGCGTGGGGGTGGGGGG
|
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